Vignettes/variation #225
Vignettes/variation #225
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Nice start @kellymccain28 👌.
A few specific changes requested and also a comment about if we want to include this as part of a larger vignette including the parameter draw uncertatinty
…riasimulation into vignettes/variation
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Hi @kellymccain28,
Looking good. In the final plot it looks like PfPR starts at 0
This can't be correct otherwise there wouldn't be any transmission later on. Can you double check if it is a processing/plotting issue? It might help to plot those last two PfPr plots on a ylim scale of (0, 0.2) to better see what is going on
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For the final plot, I changed the seed so it starts at >0% prevalence and reduced the y axis limits to c(0,0.2) as suggested. THere is a point in the plot here where the number of cases detected is at 0 for a timestep then goes back up to >0 which I think makes sense as there will still be infecitous mosquitoes buzzing around that could infect people |
Updates to the variation vignette include: